locusId sysName desc name lrn t short Group Condition_1 Concentration_1 Units_1 Condition_2 Concentration_2 Units_2 7022541 Shewana3_4186 membrane-bound metal-dependent hydrolase (RefSeq) set2IT039 2.65448445067316 7.64603461271864 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7022595 Shewana3_4240 N-6 DNA methylase (RefSeq) set1H20 1.28851910827736 5.91720652185407 propionate (C) carbon source Sodium propionate 20 mM NA 7022768 Shewana3_0023 3-ketoacyl-CoA thiolase (RefSeq) set1H35 -6.86543076711259 -19.0449460225725 Tween 20 (C) carbon source Tween 20 1 vol% NA 7022769 Shewana3_0024 multifunctional fatty acid oxidation complex subunit alpha (RefSeq) set1H36 -1.52383358224603 -9.62559336233899 propionate (C) carbon source Sodium propionate 20 mM NA 7022769 Shewana3_0024 multifunctional fatty acid oxidation complex subunit alpha (RefSeq) set1H20 -1.64131522746245 -9.36182026866956 propionate (C) carbon source Sodium propionate 20 mM NA 7022769 Shewana3_0024 multifunctional fatty acid oxidation complex subunit alpha (RefSeq) set1H35 -8.33842262529805 -22.8981770427818 Tween 20 (C) carbon source Tween 20 1 vol% NA 7022804 Shewana3_0055 hypothetical protein (RefSeq) set3IT059 -1.08520850263417 -5.66656836718775 Chloride 500 mM stress Sodium Chloride 500 mM NA 7022816 Shewana3_0067 major facilitator transporter (RefSeq) set1H48 -3.44143383845763 -11.8763752357658 Sucrose (C) carbon source Sucrose 20 mM NA 7022816 Shewana3_0067 major facilitator transporter (RefSeq) set1H47 -2.96437569932195 -12.8460872009283 Sucrose (C) carbon source Sucrose 20 mM NA 7022817 Shewana3_0068 TonB-dependent receptor (RefSeq) set1H47 -1.698710873062 -9.25679132552074 Sucrose (C) carbon source Sucrose 20 mM NA 7022817 Shewana3_0068 TonB-dependent receptor (RefSeq) set1H48 -1.75208855648797 -7.84871507310737 Sucrose (C) carbon source Sucrose 20 mM NA 7022818 Shewana3_0069 ribokinase-like domain-containing protein (RefSeq) set1H47 -3.17119607808044 -16.37533697081 Sucrose (C) carbon source Sucrose 20 mM NA 7022818 Shewana3_0069 ribokinase-like domain-containing protein (RefSeq) set1H48 -2.7245438783832 -10.9497173792882 Sucrose (C) carbon source Sucrose 20 mM NA 7022833 Shewana3_0084 hypothetical protein (RefSeq) set2IT026 2.86318497689765 6.07871106400445 L-Alanine (N) nitrogen source L-Alanine 20 mM NA 7022931 Shewana3_0181 RNP-1-like RNA-binding protein (RefSeq) set1H20 -2.30922073084091 -6.86052483254213 propionate (C) carbon source Sodium propionate 20 mM NA 7022931 Shewana3_0181 RNP-1-like RNA-binding protein (RefSeq) set1H36 -2.85427528753488 -7.70253801766675 propionate (C) carbon source Sodium propionate 20 mM NA 7022931 Shewana3_0181 RNP-1-like RNA-binding protein (RefSeq) set2IT012 -1.50361539741736 -5.24764063758217 L-Isoleucine (C) carbon source L-Isoleucine 20 mM NA 7022992 Shewana3_0233 TPR repeat-containing protein (RefSeq) set3IT082 1.43420330564946 5.36982347455909 Spectinomycin 0.025 mg/ml stress Spectinomycin dihydrochloride pentahydrate 0.025 mg/ml NA 7022992 Shewana3_0233 TPR repeat-containing protein (RefSeq) set4IT083 1.68273864741538 5.27739298515126 Choline chloride 450 mM stress Choline chloride 450 mM NA 7023012 Shewana3_0250 aldehyde dehydrogenase (RefSeq) set2IT009 -2.45601112828865 -5.63943844683971 Thymidine (C) carbon source Thymidine 10 mM NA 7023012 Shewana3_0250 aldehyde dehydrogenase (RefSeq) set2IT018 -2.16236741446852 -5.19689424285403 Thymidine (C) carbon source Thymidine 10 mM NA 7023013 Shewana3_0251 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) set2IT018 -1.93041899524678 -9.57245984826838 Thymidine (C) carbon source Thymidine 10 mM NA 7023013 Shewana3_0251 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) set2IT009 -1.9663861277151 -9.20101793180397 Thymidine (C) carbon source Thymidine 10 mM NA 7023014 Shewana3_0252 ATPase domain-containing protein (RefSeq) set1H26 -1.09989103888654 -5.2432132943228 acetate (C) carbon source Potassium acetate 20 mM NA 7023034 Shewana3_0272 methyl-accepting chemotaxis sensory transducer (RefSeq) set4IT096 -2.01488148978878 -7.11223331739493 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023034 Shewana3_0272 methyl-accepting chemotaxis sensory transducer (RefSeq) set4IT095 -1.70490452812863 -10.9518936733218 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023034 Shewana3_0272 methyl-accepting chemotaxis sensory transducer (RefSeq) set4IT094 -1.77080401794496 -7.96295977035088 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023034 Shewana3_0272 methyl-accepting chemotaxis sensory transducer (RefSeq) set4IT093 -2.16688849505329 -8.45389929963111 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023115 Shewana3_0353 hypothetical protein (RefSeq) set4IT083 -2.26024919441304 -5.4308023459011 Choline chloride 450 mM stress Choline chloride 450 mM NA 7023115 Shewana3_0353 hypothetical protein (RefSeq) set3IT059 -2.36772698112999 -5.44957366006706 Chloride 500 mM stress Sodium Chloride 500 mM NA 7023177 Shewana3_0411 Ppx/GppA phosphatase (RefSeq) set3IT091 1.49059776082657 12.0053607015726 5-Hydroxymethylfurfural 10 mM stress 5-Hydroxymethylfurfural 10 mM Dimethyl Sulfoxide 0.428571429 vol% 7023185 Shewana3_0419 type IV-A pilus assembly ATPase PilB (RefSeq) set1H15 1.04694151643824 5.37679072730648 L-Threonine (C) carbon source L-Threonine 20 mM NA 7023202 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) set4IT093 -2.59752988593962 -9.52846268929115 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023202 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) set4IT095 -2.46825386053032 -10.645958767613 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023202 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) set4IT094 -2.89339876513349 -11.783401548589 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023202 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) set4IT096 -3.08031236289081 -9.94844442404289 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023209 Shewana3_0443 permease (RefSeq) set4IT083 -3.92140855684468 -10.968452759417 Choline chloride 450 mM stress Choline chloride 450 mM NA 7023209 Shewana3_0443 permease (RefSeq) set4IT082 -2.86002192047171 -7.97551678539 Choline chloride 300 mM stress Choline chloride 300 mM NA 7023214 Shewana3_0448 major facilitator transporter (RefSeq) set4IT088 -1.6340134466995 -8.63568211055025 1-ethyl-3-methylimidazolium acetate 30 mM stress 1-ethyl-3-methylimidazolium acetate 30 mM NA 7023275 Shewana3_0509 short-chain dehydrogenase/reductase SDR (RefSeq) set4IT093 1.08468067404315 5.02042265592459 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023305 Shewana3_0539 hypothetical protein (RefSeq) set1H36 -1.26675369321507 -5.23516364795981 propionate (C) carbon source Sodium propionate 20 mM NA 7023337 Shewana3_0571 response regulator receiver protein (RefSeq) set4IT096 1.50463218675491 5.38795907892393 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023340 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) set1H36 -1.92398558339986 -5.29411636542298 propionate (C) carbon source Sodium propionate 20 mM NA 7023340 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) set1H20 -1.77324367949041 -6.58427699404427 propionate (C) carbon source Sodium propionate 20 mM NA 7023362 Shewana3_0592 carbohydrate kinase, YjeF related protein (RefSeq) set4IT096 -1.10653872915597 -5.18435388756952 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023365 Shewana3_0595 DNA mismatch repair protein (RefSeq) set1H15 1.48883031722203 5.32572332700985 L-Threonine (C) carbon source L-Threonine 20 mM NA 7023381 Shewana3_0611 arginine succinyltransferase (RefSeq) set1H10 -7.14708472474889 -8.85915978501134 L-Arginine (N) nitrogen source L-Arginine 10 mM NA 7023381 Shewana3_0611 arginine succinyltransferase (RefSeq) set1H5 -9.322889023635 -7.52928188452983 L-Arginine (N) nitrogen source L-Arginine 10 mM NA 7023385 Shewana3_0615 two component transcriptional regulator (RefSeq) set4IT083 -1.52693732036908 -5.67907127612671 Choline chloride 450 mM stress Choline chloride 450 mM NA 7023408 Shewana3_0638 hypothetical protein (RefSeq) set4IT093 -1.67423199839828 -8.83101742810148 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023408 Shewana3_0638 hypothetical protein (RefSeq) set4IT096 -1.38305369369096 -7.28286655631238 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023408 Shewana3_0638 hypothetical protein (RefSeq) set4IT095 -1.2155997280494 -7.36143118607823 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023409 Shewana3_0639 hypothetical protein (RefSeq) set3IT086 1.52939501192549 5.19043957754683 methylglyoxal 0.004 vol% stress methylglyoxal 0.004 vol% NA 7023430 Shewana3_0660 hypothetical protein (RefSeq) set4IT074 -2.75271191501927 -13.0197002175936 Aluminum chloride 5 mM stress Aluminum chloride hydrate 5 mM NA 7023433 Shewana3_0663 protein of unknown function RIO1 (RefSeq) set2IT039 1.29489387588825 8.01426706337553 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7023470 Shewana3_0700 hypothetical protein (RefSeq) set4IT067 -1.34441231540272 -6.35337865183305 perchlorate 150 mM stress Sodium perchlorate monohydrate 150 mM NA 7023518 Shewana3_0747 diguanylate cyclase (RefSeq) set3IT061 -2.07348024941348 -5.48323147269734 LB lb NA NA 7023590 Shewana3_0819 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq) set2IT030 -3.23802511130676 -10.4441266848965 L-Proline (N) nitrogen source L-Proline 20 mM NA 7023590 Shewana3_0819 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq) set2IT025 -3.05497897693352 -10.9035075158702 L-Proline (N) nitrogen source L-Proline 20 mM NA 7023594 Shewana3_0823 adenylate cyclase (RefSeq) set3IT059 -1.72538248809557 -5.56679220452366 Chloride 500 mM stress Sodium Chloride 500 mM NA 7023594 Shewana3_0823 adenylate cyclase (RefSeq) set4IT072 -1.46955005221816 -5.60838338105121 Tetracycline 0.001 mg/ml stress Tetracycline hydrochloride 0.001 mg/ml NA 7023605 Shewana3_0834 hypothetical protein (RefSeq) set1H20 -2.19876143927875 -8.13041311818582 propionate (C) carbon source Sodium propionate 20 mM NA 7023605 Shewana3_0834 hypothetical protein (RefSeq) set1H36 -2.24608980209892 -9.19196841542152 propionate (C) carbon source Sodium propionate 20 mM NA 7023606 Shewana3_0835 LysR family transcriptional regulator (RefSeq) set1H36 -2.02258362003926 -5.85033480017546 propionate (C) carbon source Sodium propionate 20 mM NA 7023606 Shewana3_0835 LysR family transcriptional regulator (RefSeq) set1H20 -2.36781402695136 -6.69239685838181 propionate (C) carbon source Sodium propionate 20 mM NA 7023640 Shewana3_0869 hypothetical protein (RefSeq) set1H20 -1.12189323596933 -5.07085772240566 propionate (C) carbon source Sodium propionate 20 mM NA 7023668 Shewana3_0897 aminopeptidase N (RefSeq) set4IT072 -1.00600106160081 -5.20994914507511 Tetracycline 0.001 mg/ml stress Tetracycline hydrochloride 0.001 mg/ml NA 7023705 Shewana3_0935 TRAP dicarboxylate transporter- DctP subunit (RefSeq) set1H21 -1.47053137599968 -6.19358531863476 succinate (C) carbon source Sodium succinate dibasic hexahydrate 20 mM NA 7023723 Shewana3_0953 xanthine/uracil/vitamin C permease (RefSeq) set1H20 1.70800357029467 5.87137922370031 propionate (C) carbon source Sodium propionate 20 mM NA 7023723 Shewana3_0953 xanthine/uracil/vitamin C permease (RefSeq) set1H36 1.75545716822058 5.46368560934322 propionate (C) carbon source Sodium propionate 20 mM NA 7023731 Shewana3_0961 hypothetical protein (RefSeq) set3IT061 -1.00509832848764 -5.92876878770938 LB lb NA NA 7023889 Shewana3_1109 hybrid sensory histidine kinase BarA (RefSeq) set4IT094 -1.68544150346316 -5.63779973286026 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023889 Shewana3_1109 hybrid sensory histidine kinase BarA (RefSeq) set4IT093 -1.47247177050467 -5.28812738750034 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023889 Shewana3_1109 hybrid sensory histidine kinase BarA (RefSeq) set4IT095 -1.53069177636342 -6.77133304544398 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7023889 Shewana3_1109 hybrid sensory histidine kinase BarA (RefSeq) set1H15 1.85319759092749 11.7491071917418 L-Threonine (C) carbon source L-Threonine 20 mM NA 7023905 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) set1H15 1.5710071682376 5.30930989142804 L-Threonine (C) carbon source L-Threonine 20 mM NA 7023905 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) set2IT039 1.84057770433803 5.68641962525828 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7023921 Shewana3_1133 SSU ribosomal protein S30P / sigma 54 modulation protein (RefSeq) set1H36 2.05039494225275 5.02523660700822 propionate (C) carbon source Sodium propionate 20 mM NA 7023924 Shewana3_1136 Trp operon repressor (RefSeq) set1H36 1.401927333013 5.11835174350059 propionate (C) carbon source Sodium propionate 20 mM NA 7023936 Shewana3_1148 PepSY-associated TM helix domain-containing protein (RefSeq) set3IT059 2.11315105137287 8.7733978283161 Chloride 500 mM stress Sodium Chloride 500 mM NA 7023936 Shewana3_1148 PepSY-associated TM helix domain-containing protein (RefSeq) set4IT067 -1.59883391643963 -9.52193279042858 perchlorate 150 mM stress Sodium perchlorate monohydrate 150 mM NA 7023976 Shewana3_1184 glutaminase (RefSeq) set2IT028 -4.5813440168324 -5.5350099233851 L-Glutamine (N) nitrogen source L-Glutamine 20 mM NA 7024018 Shewana3_1226 hypothetical protein (RefSeq) set3IT059 -4.12887521653394 -6.60333871605497 Chloride 500 mM stress Sodium Chloride 500 mM NA 7024018 Shewana3_1226 hypothetical protein (RefSeq) set1H36 -2.05965272671675 -5.11497312455935 propionate (C) carbon source Sodium propionate 20 mM NA 7024020 Shewana3_1228 hypothetical protein (RefSeq) set2IT039 2.0711473766356 6.87402596369682 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7024094 Shewana3_1302 polysaccharide biosynthesis protein (RefSeq) set4IT094 -2.69529012818543 -5.1553583801004 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7024094 Shewana3_1302 polysaccharide biosynthesis protein (RefSeq) set4IT095 -2.12348362750094 -6.45701946559482 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7024094 Shewana3_1302 polysaccharide biosynthesis protein (RefSeq) set4IT093 -3.0107617309722 -5.38169143369509 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7024133 Shewana3_1340 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) set1H15 3.61539521676657 10.9502181819055 L-Threonine (C) carbon source L-Threonine 20 mM NA 7024262 Shewana3_1454 hypothetical protein (RefSeq) set1H15 2.09153440659731 5.31052796716293 L-Threonine (C) carbon source L-Threonine 20 mM NA 7024267 Shewana3_1459 ATPase (RefSeq) set1H15 2.43545888924552 7.37875747816522 L-Threonine (C) carbon source L-Threonine 20 mM NA 7024276 Shewana3_1468 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) set3IT080 -2.77610903737669 -5.19101905845279 Chloramphenicol 0.0001 mg/ml stress Chloramphenicol 1e-04 mg/ml Ethanol 0.008571429 vol% 7024282 Shewana3_1474 FAD dependent oxidoreductase (RefSeq) set1H36 -1.91759261775654 -5.51038796819372 propionate (C) carbon source Sodium propionate 20 mM NA 7024282 Shewana3_1474 FAD dependent oxidoreductase (RefSeq) set1H20 -2.61472348523319 -8.18878816842659 propionate (C) carbon source Sodium propionate 20 mM NA 7024286 Shewana3_1478 hypothetical protein (RefSeq) set4IT095 -1.92738097590186 -5.37471259529886 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7024363 Shewana3_1555 formate acetyltransferase (RefSeq) set4IT077 -1.52482718208398 -6.90901966185442 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7024363 Shewana3_1555 formate acetyltransferase (RefSeq) set4IT076 -2.01214712043911 -8.28155174730386 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7024412 Shewana3_1599 hypothetical protein (RefSeq) set1H36 -2.65853386353144 -5.25279632059902 propionate (C) carbon source Sodium propionate 20 mM NA 7024412 Shewana3_1599 hypothetical protein (RefSeq) set1H20 -2.71552781099208 -7.11994776225389 propionate (C) carbon source Sodium propionate 20 mM NA 7024417 Shewana3_1601 23S rRNA m(2)G2445 methyltransferase (RefSeq) set2IT031 -1.76548604471022 -6.21623007994798 L-Alanine (N) nitrogen source L-Alanine 20 mM NA 7024417 Shewana3_1601 23S rRNA m(2)G2445 methyltransferase (RefSeq) set3IT059 -2.231220896766 -5.52093713898916 Chloride 500 mM stress Sodium Chloride 500 mM NA 7024438 Shewana3_1616 hypothetical protein (RefSeq) set2IT039 1.30242355990946 7.09944472032788 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7024441 Shewana3_1619 serine/threonine protein kinase (RefSeq) set2IT039 1.45736237058017 5.91433284939416 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7024494 Shewana3_1672 isovaleryl-CoA dehydrogenase (RefSeq) set2IT004 -5.25073646847246 -9.78299637216548 L-Leucine (C) carbon source L-Leucine 20 mM NA 7024494 Shewana3_1672 isovaleryl-CoA dehydrogenase (RefSeq) set2IT013 -5.23040118177746 -12.5259153757629 L-Leucine (C) carbon source L-Leucine 20 mM NA 7024550 Shewana3_1728 succinylarginine dihydrolase (RefSeq) set1H5 -7.51830639443085 -6.9234692219958 L-Arginine (N) nitrogen source L-Arginine 10 mM NA 7024550 Shewana3_1728 succinylarginine dihydrolase (RefSeq) set1H10 -7.58739533035829 -6.62882204148988 L-Arginine (N) nitrogen source L-Arginine 10 mM NA 7024780 Shewana3_1958 TonB-dependent receptor (RefSeq) set3IT082 1.51275733780245 5.47832730621937 Spectinomycin 0.025 mg/ml stress Spectinomycin dihydrochloride pentahydrate 0.025 mg/ml NA 7024891 Shewana3_2065 L-ribulose-5-phosphate 4-epimerase (RefSeq) set1H28 -6.9437751152767 -7.16781291128231 L-Arabinose (C) carbon source L-Arabinose 20 mM NA 7024892 Shewana3_2066 L-arabinose isomerase (RefSeq) set1H28 -8.66886401946312 -7.07651432501343 L-Arabinose (C) carbon source L-Arabinose 20 mM NA 7024896 Shewana3_2070 dihydroxy-acid dehydratase (RefSeq) set1H28 -6.33201793659739 -10.5008142396943 L-Arabinose (C) carbon source L-Arabinose 20 mM NA 7024897 Shewana3_2071 short-chain dehydrogenase/reductase SDR (RefSeq) set1H28 -5.98955844915225 -8.44809209930734 L-Arabinose (C) carbon source L-Arabinose 20 mM NA 7024898 Shewana3_2072 aldose 1-epimerase (RefSeq) set1H28 -6.53035066570454 -20.5400847936847 L-Arabinose (C) carbon source L-Arabinose 20 mM NA 7024900 Shewana3_2074 ABC transporter related (RefSeq) set1H28 -6.37395956271184 -9.54311052476478 L-Arabinose (C) carbon source L-Arabinose 20 mM NA 7024901 Shewana3_2075 inner-membrane translocator (RefSeq) set1H28 -6.74701834756241 -6.33104681481419 L-Arabinose (C) carbon source L-Arabinose 20 mM NA 7024973 Shewana3_2144 Na+/H+ antiporter NhaC (RefSeq) set2IT026 -3.15784611845463 -5.38769017546977 L-Alanine (N) nitrogen source L-Alanine 20 mM NA 7024983 Shewana3_2154 acyl-CoA dehydrogenase (RefSeq) set1H35 -1.48805114712821 -5.76372831536632 Tween 20 (C) carbon source Tween 20 1 vol% NA 7025018 Shewana3_2181 hypothetical protein (RefSeq) set2IT039 1.53969557816748 5.08322790702955 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7025060 Shewana3_2223 CoA-binding domain-containing protein (RefSeq) set1H20 -3.35361392385111 -6.2821001216796 propionate (C) carbon source Sodium propionate 20 mM NA 7025060 Shewana3_2223 CoA-binding domain-containing protein (RefSeq) set1H36 -3.19465691002081 -7.2439095087819 propionate (C) carbon source Sodium propionate 20 mM NA 7025147 Shewana3_2310 glucose/galactose transporter (RefSeq) set2IT007 -1.82633654520838 -6.94589554061994 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025147 Shewana3_2310 glucose/galactose transporter (RefSeq) set2IT016 -1.99164582314786 -6.65403970630316 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025147 Shewana3_2310 glucose/galactose transporter (RefSeq) set1H27 -2.44952590581811 -10.8569793908747 D-Maltose (C) carbon source D-Maltose monohydrate 20 mM NA 7025147 Shewana3_2310 glucose/galactose transporter (RefSeq) set1H43 -2.52712754790589 -11.8348496468099 D-Maltose (C) carbon source D-Maltose monohydrate 20 mM NA 7025148 Shewana3_2311 alpha amylase, catalytic region (RefSeq) set1H43 -5.14087564103973 -10.1691285875934 D-Maltose (C) carbon source D-Maltose monohydrate 20 mM NA 7025148 Shewana3_2311 alpha amylase, catalytic region (RefSeq) set1H27 -5.09173884613999 -10.3187655430374 D-Maltose (C) carbon source D-Maltose monohydrate 20 mM NA 7025160 Shewana3_2323 acyl-CoA dehydrogenase (RefSeq) set1H35 -1.61153827788654 -9.68326061553882 Tween 20 (C) carbon source Tween 20 1 vol% NA 7025160 Shewana3_2323 acyl-CoA dehydrogenase (RefSeq) set1H26 -1.54727363173484 -7.71896286458056 acetate (C) carbon source Potassium acetate 20 mM NA 7025228 Shewana3_2389 hypothetical protein (RefSeq) set3IT086 1.46759762448589 6.02488450278329 methylglyoxal 0.004 vol% stress methylglyoxal 0.004 vol% NA 7025298 Shewana3_2458 peptidylprolyl isomerase, FKBP-type (RefSeq) set2IT045 1.80399621020043 5.61374387666412 LB lb NA NA 7025381 Shewana3_2536 prolyl oligopeptidase (RefSeq) set2IT039 1.09777822522214 5.10170028249639 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7025387 Shewana3_2542 Na+/H+ antiporter NhaC (RefSeq) set2IT026 -1.87039391392332 -5.77525925971017 L-Alanine (N) nitrogen source L-Alanine 20 mM NA 7025418 Shewana3_2573 cytidine deaminase (RefSeq) set2IT011 -2.08898456663237 -9.32551661485819 Cytidine (C) carbon source Cytidine 20 mM NA 7025418 Shewana3_2573 cytidine deaminase (RefSeq) set2IT020 -2.4354526432054 -11.7787634258372 Cytidine (C) carbon source Cytidine 20 mM NA 7025448 Shewana3_2603 anaerobic ribonucleoside triphosphate reductase (RefSeq) set4IT076 -2.21705022881955 -5.67213785401708 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7025459 Shewana3_2614 LysR family transcriptional regulator (RefSeq) set2IT029 -2.60926703475088 -5.94769952528388 Glycine (N) nitrogen source Glycine 20 mM NA 7025473 Shewana3_2628 porin (RefSeq) set2IT045 1.72480164754958 6.09885948460277 LB lb NA NA 7025473 Shewana3_2628 porin (RefSeq) set3IT061 1.49805395269071 5.7700371779894 LB lb NA NA 7025473 Shewana3_2628 porin (RefSeq) set3IT082 1.45190855714052 6.29278022051039 Spectinomycin 0.025 mg/ml stress Spectinomycin dihydrochloride pentahydrate 0.025 mg/ml NA 7025568 Shewana3_2719 choline/carnitine/betaine transporter (RefSeq) set3IT059 -5.52590428329965 -7.57196943233803 Chloride 500 mM stress Sodium Chloride 500 mM NA 7025568 Shewana3_2719 choline/carnitine/betaine transporter (RefSeq) set3IT052 -1.26000245567819 -6.59899288004307 nitrate 300 mM stress Sodium nitrate 300 mM NA 7025618 Shewana3_2769 acyl-CoA dehydrogenase domain-containing protein (RefSeq) set2IT012 -6.06475278957097 -10.0832681341371 L-Isoleucine (C) carbon source L-Isoleucine 20 mM NA 7025618 Shewana3_2769 acyl-CoA dehydrogenase domain-containing protein (RefSeq) set2IT003 -5.68875738078741 -9.94104473521126 L-Isoleucine (C) carbon source L-Isoleucine 20 mM NA 7025618 Shewana3_2769 acyl-CoA dehydrogenase domain-containing protein (RefSeq) set2IT032 -2.72602633032179 -10.5854271122966 L-Isoleucine (N) nitrogen source L-Isoleucine 20 mM NA 7025618 Shewana3_2769 acyl-CoA dehydrogenase domain-containing protein (RefSeq) set2IT027 -2.83260369703908 -9.51824081015427 L-Isoleucine (N) nitrogen source L-Isoleucine 20 mM NA 7025619 Shewana3_2770 methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq) set2IT003 -4.97979547294302 -7.95741783876784 L-Isoleucine (C) carbon source L-Isoleucine 20 mM NA 7025619 Shewana3_2770 methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq) set2IT012 -5.15916114546106 -10.7120443003306 L-Isoleucine (C) carbon source L-Isoleucine 20 mM NA 7025626 Shewana3_2777 maleylacetoacetate isomerase (RefSeq) set2IT005 -2.59973122126308 -6.9800062065865 casaminos (C) carbon source casamino acids 2 mg/ml NA 7025626 Shewana3_2777 maleylacetoacetate isomerase (RefSeq) set2IT014 -3.25330578759614 -8.63189535407382 casaminos (C) carbon source casamino acids 2 mg/ml NA 7025644 Shewana3_2795 SNF2-related protein (RefSeq) set3IT079 -1.70322298173962 -5.81139642881743 Rifampicin 0.001 mg/ml stress Rifampicin 0.001 mg/ml Dimethyl Sulfoxide 0.214285714 vol% 7025644 Shewana3_2795 SNF2-related protein (RefSeq) set3IT091 -2.8201715196136 -8.17978649372892 5-Hydroxymethylfurfural 10 mM stress 5-Hydroxymethylfurfural 10 mM Dimethyl Sulfoxide 0.428571429 vol% 7025690 Shewana3_2840 beta-ketoacyl synthase (RefSeq) set2IT040 -2.06698019677258 -12.2211317338196 Thallium(I) acetate 0.064 mg/ml stress Thallium(I) acetate 0.064 mg/ml NA 7025691 Shewana3_2841 omega-3 polyunsaturated fatty acid synthase PfaB (RefSeq) set2IT040 -2.05344160217642 -6.66173842435134 Thallium(I) acetate 0.064 mg/ml stress Thallium(I) acetate 0.064 mg/ml NA 7025691 Shewana3_2841 omega-3 polyunsaturated fatty acid synthase PfaB (RefSeq) set3IT079 -1.4477053231819 -5.10388550134624 Rifampicin 0.001 mg/ml stress Rifampicin 0.001 mg/ml Dimethyl Sulfoxide 0.214285714 vol% 7025692 Shewana3_2842 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (RefSeq) set2IT040 -2.29410111514771 -11.5301683220293 Thallium(I) acetate 0.064 mg/ml stress Thallium(I) acetate 0.064 mg/ml NA 7025734 Shewana3_2884 diguanylate cyclase (RefSeq) set4IT095 1.84966940628867 7.32800384073933 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7025734 Shewana3_2884 diguanylate cyclase (RefSeq) set4IT094 1.72620762399178 5.38425868805064 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7025773 Shewana3_2923 multi anti extrusion protein MatE (RefSeq) set2IT039 -1.27672849148759 -5.3006373172314 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7025811 Shewana3_2960 restriction modification system DNA specificity subunit (RefSeq) set2IT004 1.44214479937459 8.86872967476045 L-Leucine (C) carbon source L-Leucine 20 mM NA 7025811 Shewana3_2960 restriction modification system DNA specificity subunit (RefSeq) set2IT013 1.59502265511344 10.0202270506313 L-Leucine (C) carbon source L-Leucine 20 mM NA 7025812 Shewana3_2961 N-6 DNA methylase (RefSeq) set2IT003 -1.2137770319877 -5.71365921795246 L-Isoleucine (C) carbon source L-Isoleucine 20 mM NA 7025812 Shewana3_2961 N-6 DNA methylase (RefSeq) set2IT012 -1.31482255001831 -6.10206401506582 L-Isoleucine (C) carbon source L-Isoleucine 20 mM NA 7025812 Shewana3_2961 N-6 DNA methylase (RefSeq) set2IT004 1.25352636694595 6.46032961748555 L-Leucine (C) carbon source L-Leucine 20 mM NA 7025812 Shewana3_2961 N-6 DNA methylase (RefSeq) set2IT013 1.32778367365665 6.51050972110502 L-Leucine (C) carbon source L-Leucine 20 mM NA 7025815 Shewana3_2964 hypothetical protein (RefSeq) set2IT045 -1.17788923657661 -5.76963879903991 LB lb NA NA 7025950 Shewana3_3098 L-glutamine synthetase (RefSeq) set1H20 -1.62004016031444 -5.83508871533026 propionate (C) carbon source Sodium propionate 20 mM NA 7025950 Shewana3_3098 L-glutamine synthetase (RefSeq) set1H36 -2.0552693771642 -8.05126520167267 propionate (C) carbon source Sodium propionate 20 mM NA 7025957 Shewana3_3105 aldehyde dehydrogenase (acceptor) (RefSeq) set1H20 -2.00329751092591 -6.16461841614021 propionate (C) carbon source Sodium propionate 20 mM NA 7025957 Shewana3_3105 aldehyde dehydrogenase (acceptor) (RefSeq) set1H36 -2.65354431814836 -6.20478027491608 propionate (C) carbon source Sodium propionate 20 mM NA 7025962 Shewana3_3110 glucose/galactose transporter (RefSeq) set2IT006 -3.25182797943279 -11.7053912197389 NAG (C) carbon source N-Acetyl-D-Glucosamine 20 mM NA 7025962 Shewana3_3110 glucose/galactose transporter (RefSeq) set2IT016 -6.47823218998288 -11.3958923403407 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025962 Shewana3_3110 glucose/galactose transporter (RefSeq) set2IT007 -4.83229072556701 -10.0672663036929 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025962 Shewana3_3110 glucose/galactose transporter (RefSeq) set2IT015 -3.42152641948982 -13.9084102211009 NAG (C) carbon source N-Acetyl-D-Glucosamine 20 mM NA 7025963 Shewana3_3111 hypothetical protein (RefSeq) set2IT016 -5.09824188093945 -10.7814257091598 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025963 Shewana3_3111 hypothetical protein (RefSeq) set2IT007 -5.54440327169957 -9.22827406779345 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025964 Shewana3_3112 N-acetylglucosamine 6-phosphate deacetylase (RefSeq) set2IT007 -6.1774639071851 -8.45677140834288 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025964 Shewana3_3112 N-acetylglucosamine 6-phosphate deacetylase (RefSeq) set2IT016 -5.6945597643781 -12.7933715234519 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025964 Shewana3_3112 N-acetylglucosamine 6-phosphate deacetylase (RefSeq) set2IT015 -6.52634015258369 -12.4810745026799 NAG (C) carbon source N-Acetyl-D-Glucosamine 20 mM NA 7025964 Shewana3_3112 N-acetylglucosamine 6-phosphate deacetylase (RefSeq) set2IT006 -5.95279100781885 -9.08292941931406 NAG (C) carbon source N-Acetyl-D-Glucosamine 20 mM NA 7025965 Shewana3_3113 sugar isomerase (SIS) (RefSeq) set2IT007 -6.37453282122017 -6.76552002711294 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025965 Shewana3_3113 sugar isomerase (SIS) (RefSeq) set2IT006 -7.77264113820237 -5.36725394387557 NAG (C) carbon source N-Acetyl-D-Glucosamine 20 mM NA 7025965 Shewana3_3113 sugar isomerase (SIS) (RefSeq) set2IT015 -4.72681666372324 -10.9217182490839 NAG (C) carbon source N-Acetyl-D-Glucosamine 20 mM NA 7025965 Shewana3_3113 sugar isomerase (SIS) (RefSeq) set2IT016 -6.70759062625698 -6.07621177293436 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025966 Shewana3_3114 ATPase, BadF/BadG/BcrA/BcrD type (RefSeq) set2IT016 -6.05629780938819 -5.35808493820021 D-Glucosamine Hydrochloride (C) carbon source D-Glucosamine Hydrochloride 20 mM NA 7025966 Shewana3_3114 ATPase, BadF/BadG/BcrA/BcrD type (RefSeq) set2IT006 -4.6761955057738 -7.32093353500103 NAG (C) carbon source N-Acetyl-D-Glucosamine 20 mM NA 7025966 Shewana3_3114 ATPase, BadF/BadG/BcrA/BcrD type (RefSeq) set2IT015 -5.29555179078138 -7.9994936989705 NAG (C) carbon source N-Acetyl-D-Glucosamine 20 mM NA 7025975 Shewana3_3123 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) set2IT024 1.41699202123779 5.36943746395767 Glycine (N) nitrogen source Glycine 20 mM NA 7026015 Shewana3_3163 sodium:dicarboxylate symporter (RefSeq) set4IT083 1.30374333793189 6.23853438959848 Choline chloride 450 mM stress Choline chloride 450 mM NA 7026047 Shewana3_3189 sulfate ABC transporter, periplasmic sulfate-binding protein (RefSeq) set4IT083 -1.69529514892204 -5.55710572503896 Choline chloride 450 mM stress Choline chloride 450 mM NA 7026050 Shewana3_3192 sulfate ABC transporter, ATPase subunit (RefSeq) set4IT082 -1.16445751837743 -5.08647833267909 Choline chloride 300 mM stress Choline chloride 300 mM NA 7026086 Shewana3_3228 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) set3IT082 1.07539403634787 5.41556906035828 Spectinomycin 0.025 mg/ml stress Spectinomycin dihydrochloride pentahydrate 0.025 mg/ml NA 7026086 Shewana3_3228 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) set2IT039 1.95932860741877 5.2926254392805 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7026091 Shewana3_3233 pyridoxamine 5'-phosphate oxidase-related, FMN-binding (RefSeq) set3IT059 1.53143524583212 7.27731896771882 Chloride 500 mM stress Sodium Chloride 500 mM NA 7026093 Shewana3_3235 TonB-dependent heme/hemoglobin receptor family protein (RefSeq) set1H20 -1.37482009084619 -6.0901198727307 propionate (C) carbon source Sodium propionate 20 mM NA 7026135 Shewana3_3277 cobalamin synthase (RefSeq) set4IT093 1.74474286848744 6.25511874208677 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026135 Shewana3_3277 cobalamin synthase (RefSeq) set4IT095 1.45222814730175 5.02700230743537 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026135 Shewana3_3277 cobalamin synthase (RefSeq) set4IT094 1.34646311553642 6.8635735319274 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026135 Shewana3_3277 cobalamin synthase (RefSeq) set4IT096 1.53964367114653 5.28898810490138 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026137 Shewana3_3279 transport system permease protein (RefSeq) set2IT029 -2.61077191833835 -8.5118768016889 Glycine (N) nitrogen source Glycine 20 mM NA 7026137 Shewana3_3279 transport system permease protein (RefSeq) set2IT024 -2.17388852707671 -8.2553031591727 Glycine (N) nitrogen source Glycine 20 mM NA 7026138 Shewana3_3280 ABC transporter related (RefSeq) set2IT024 -2.38016556415571 -8.53023042081263 Glycine (N) nitrogen source Glycine 20 mM NA 7026138 Shewana3_3280 ABC transporter related (RefSeq) set2IT029 -2.42772580007733 -9.46104953015671 Glycine (N) nitrogen source Glycine 20 mM NA 7026176 Shewana3_3318 flavocytochrome c (RefSeq) set4IT076 -4.269797708577 -21.528282793204 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026176 Shewana3_3318 flavocytochrome c (RefSeq) set4IT077 -3.93870407068017 -19.7280176281222 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026184 Shewana3_3326 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) set3IT092 -1.60184651275735 -6.58068498487496 Vanillin 1 mM stress Vanillin 1 mM Dimethyl Sulfoxide 0.042857143 vol% 7026223 Shewana3_3365 serine transporter, putative (RefSeq) set2IT024 1.7362346049715 6.33025789879298 Glycine (N) nitrogen source Glycine 20 mM NA 7026251 Shewana3_3393 ABC transporter related (RefSeq) set3IT095 -1.86756874343727 -7.97332940985785 syringaldehyde 1 mM stress syringaldehyde 1 mM Dimethyl Sulfoxide 0.042857143 vol% 7026258 Shewana3_3400 phosphoribulokinase/uridine kinase (RefSeq) set2IT029 -2.52032354897787 -7.22526048040154 Glycine (N) nitrogen source Glycine 20 mM NA 7026258 Shewana3_3400 phosphoribulokinase/uridine kinase (RefSeq) set2IT024 -2.13126281881327 -5.65268070857583 Glycine (N) nitrogen source Glycine 20 mM NA 7026278 Shewana3_3420 amino acid carrier protein (RefSeq) set2IT038 -1.10449829883136 -6.12115479383396 sodium fluoride 200 mM stress sodium fluoride 200 mM NA 7026304 Shewana3_3446 alkaline phosphatase (RefSeq) set3IT092 -2.23084355070794 -6.96466076302282 Vanillin 1 mM stress Vanillin 1 mM Dimethyl Sulfoxide 0.042857143 vol% 7026304 Shewana3_3446 alkaline phosphatase (RefSeq) set3IT079 -2.68653458988064 -6.30477872545793 Rifampicin 0.001 mg/ml stress Rifampicin 0.001 mg/ml Dimethyl Sulfoxide 0.214285714 vol% 7026309 Shewana3_3451 hypothetical protein (RefSeq) set1H15 -2.24359329896781 -9.83389120569567 L-Threonine (C) carbon source L-Threonine 20 mM NA 7026311 Shewana3_3453 peptidase M50 (RefSeq) set3IT082 -1.20554388184071 -5.90015522200356 Spectinomycin 0.025 mg/ml stress Spectinomycin dihydrochloride pentahydrate 0.025 mg/ml NA 7026347 Shewana3_3489 hypothetical protein (RefSeq) set3IT059 -1.69385952230168 -5.65834284915981 Chloride 500 mM stress Sodium Chloride 500 mM NA 7026391 Shewana3_3533 isochorismatase hydrolase (RefSeq) set1H13 -2.09943885166295 -5.64462242141713 L-Alanine (C) carbon source L-Alanine 20 mM NA 7026391 Shewana3_3533 isochorismatase hydrolase (RefSeq) set1H29 -1.78014042194042 -5.60478711106118 L-Alanine (C) carbon source L-Alanine 20 mM NA 7026437 Shewana3_3579 aldose 1-epimerase (RefSeq) set1H27 -2.67930762489148 -11.1511188111961 D-Maltose (C) carbon source D-Maltose monohydrate 20 mM NA 7026437 Shewana3_3579 aldose 1-epimerase (RefSeq) set1H43 -2.46592520645023 -11.9931170725973 D-Maltose (C) carbon source D-Maltose monohydrate 20 mM NA 7026450 Shewana3_3592 excinuclease ABC subunit A (RefSeq) set3IT059 -3.81698929043707 -13.3245392742708 Chloride 500 mM stress Sodium Chloride 500 mM NA 7026450 Shewana3_3592 excinuclease ABC subunit A (RefSeq) set3IT052 -2.01958915117299 -14.0361164244692 nitrate 300 mM stress Sodium nitrate 300 mM NA 7026450 Shewana3_3592 excinuclease ABC subunit A (RefSeq) set2IT043 -1.4941652296972 -10.609993163982 Cisplatin 0.05 mg/ml stress Cisplatin 0.05 mg/ml NA 7026458 Shewana3_3600 HAD family hydrolase (RefSeq) set2IT031 3.77022211327855 6.78324662363651 L-Alanine (N) nitrogen source L-Alanine 20 mM NA 7026471 Shewana3_3613 bifunctional aspartate kinase II/homoserine dehydrogenase II (RefSeq) set1H15 -3.55392635079631 -13.7280325059777 L-Threonine (C) carbon source L-Threonine 20 mM NA 7026487 Shewana3_3630 TonB-dependent receptor (RefSeq) set3IT082 1.3077900576581 7.54187211619685 Spectinomycin 0.025 mg/ml stress Spectinomycin dihydrochloride pentahydrate 0.025 mg/ml NA 7026494 Shewana3_3637 hypothetical protein (RefSeq) set4IT077 -3.1207825506674 -7.46037934391858 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026494 Shewana3_3637 hypothetical protein (RefSeq) set4IT082 -1.34281876980464 -5.00561887637898 Choline chloride 300 mM stress Choline chloride 300 mM NA 7026494 Shewana3_3637 hypothetical protein (RefSeq) set4IT076 -3.67297906227232 -6.70485231402395 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026495 Shewana3_3638 ABC-2 type transporter (RefSeq) set4IT076 -2.99075614172087 -8.00776074659591 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026495 Shewana3_3638 ABC-2 type transporter (RefSeq) set4IT077 -2.59320715727938 -7.28816606081492 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026496 Shewana3_3639 secretion protein HlyD family protein (RefSeq) set4IT076 -3.10713873083262 -6.13297197802996 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026496 Shewana3_3639 secretion protein HlyD family protein (RefSeq) set4IT077 -2.77827644550559 -6.69681646501058 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026497 Shewana3_3640 outer membrane efflux protein (RefSeq) set4IT077 -2.00200712618085 -5.08338851566842 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026497 Shewana3_3640 outer membrane efflux protein (RefSeq) set4IT076 -2.70456921024414 -6.57619468741947 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026499 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) set2IT013 -3.33157944093615 -9.26521470111839 L-Leucine (C) carbon source L-Leucine 20 mM NA 7026499 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) set2IT004 -3.28709225740858 -6.27517211552 L-Leucine (C) carbon source L-Leucine 20 mM NA 7026500 Shewana3_3643 hypothetical protein (RefSeq) set2IT013 -1.06551288276632 -6.34041709966475 L-Leucine (C) carbon source L-Leucine 20 mM NA 7026514 Shewana3_3657 methylation site containing protein (RefSeq) set1H16 1.54984607001871 5.12366545296755 L-Serine (C) carbon source L-Serine 20 mM NA 7026537 Shewana3_3680 uridine phosphorylase (RefSeq) set2IT020 -4.07169687892045 -14.9565870821061 Cytidine (C) carbon source Cytidine 20 mM NA 7026537 Shewana3_3680 uridine phosphorylase (RefSeq) set2IT017 -6.20467090367018 -10.5699234424556 Uridine (C) carbon source Uridine 20 mM NA 7026537 Shewana3_3680 uridine phosphorylase (RefSeq) set2IT008 -5.90454302991371 -10.6008851641624 Uridine (C) carbon source Uridine 20 mM NA 7026537 Shewana3_3680 uridine phosphorylase (RefSeq) set2IT011 -4.37802784945868 -10.2315131596567 Cytidine (C) carbon source Cytidine 20 mM NA 7026565 Shewana3_3708 ATPase domain-containing protein (RefSeq) set4IT083 1.29343245365307 7.17170132071737 Choline chloride 450 mM stress Choline chloride 450 mM NA 7026591 Shewana3_3734 delta-aminolevulinic acid dehydratase (RefSeq) set2IT039 1.86058018298705 5.08626982531456 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7026681 Shewana3_3814 AMP-dependent synthetase and ligase (RefSeq) set1H20 -1.31809680127387 -7.02089061382184 propionate (C) carbon source Sodium propionate 20 mM NA 7026696 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) set4IT093 -1.31272499206727 -8.43086320836845 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026696 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) set4IT096 -1.43906133907415 -9.13522878994278 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026696 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) set4IT095 -1.29260153314558 -8.60689715597645 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026696 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) set4IT094 -1.43934214256018 -9.98476352872176 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026728 Shewana3_3861 hypothetical protein (RefSeq) set3IT061 -1.44962043039103 -5.55572332047523 LB lb NA NA 7026732 Shewana3_3865 acyltransferase 3 (RefSeq) set4IT072 1.11037327337118 8.02458354027697 Tetracycline 0.001 mg/ml stress Tetracycline hydrochloride 0.001 mg/ml NA 7026737 Shewana3_3870 hypothetical protein (RefSeq) set2IT045 -1.35306467289453 -5.98406834156446 LB lb NA NA 7026738 Shewana3_3871 ornithine decarboxylase (RefSeq) set2IT026 1.071962880139 7.27872246672889 L-Alanine (N) nitrogen source L-Alanine 20 mM NA 7026743 Shewana3_3876 hypothetical protein (RefSeq) set1H13 -2.91867576691162 -14.277159232593 L-Alanine (C) carbon source L-Alanine 20 mM NA 7026743 Shewana3_3876 hypothetical protein (RefSeq) set1H29 -2.98123445306438 -17.2404711113601 L-Alanine (C) carbon source L-Alanine 20 mM NA 7026744 Shewana3_3877 hypothetical protein (RefSeq) set4IT076 -1.62530129708565 -10.823067990426 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026744 Shewana3_3877 hypothetical protein (RefSeq) set4IT077 -1.42147856513049 -7.86164076459182 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026751 Shewana3_3883 transport-associated (RefSeq) set3IT092 -3.38224295361271 -6.62341969817179 Vanillin 1 mM stress Vanillin 1 mM Dimethyl Sulfoxide 0.042857143 vol% 7026751 Shewana3_3883 transport-associated (RefSeq) set3IT079 -3.04681362283489 -6.9719555998789 Rifampicin 0.001 mg/ml stress Rifampicin 0.001 mg/ml Dimethyl Sulfoxide 0.214285714 vol% 7026765 Shewana3_3897 pilus assembly protein, PilO (RefSeq) set1H15 1.08105146488299 5.88273425232131 L-Threonine (C) carbon source L-Threonine 20 mM NA 7026781 Shewana3_3910 formate dehydrogenase accessory protein FdhD, putative (RefSeq) set1H36 -1.37356260153962 -5.863645462374 propionate (C) carbon source Sodium propionate 20 mM NA 7026782 Shewana3_3911 hypothetical protein (RefSeq) set4IT083 1.29583463959519 5.79826097216699 Choline chloride 450 mM stress Choline chloride 450 mM NA 7026784 Shewana3_3913 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) set2IT039 1.30441239633737 6.18943803490741 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7026784 Shewana3_3913 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) set4IT076 -1.7631606746152 -13.0243440169181 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026784 Shewana3_3913 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) set4IT077 -1.6902736068639 -12.8323965192059 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026785 Shewana3_3914 cytoplasmic chaperone TorD family protein (RefSeq) set4IT076 -1.7332879181026 -9.65144748268441 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026785 Shewana3_3914 cytoplasmic chaperone TorD family protein (RefSeq) set4IT077 -1.6398080518192 -10.9407096419786 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026789 Shewana3_3918 formate dehydrogenase gamma subunit (RefSeq) set1H20 -1.34379863372796 -6.68954745742692 propionate (C) carbon source Sodium propionate 20 mM NA 7026789 Shewana3_3918 formate dehydrogenase gamma subunit (RefSeq) set1H36 -1.11661762307988 -5.45151586585929 propionate (C) carbon source Sodium propionate 20 mM NA 7026793 Shewana3_3922 formate dehydrogenase gamma subunit (RefSeq) set4IT076 -1.04083289592837 -8.07549179159866 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026821 Shewana3_3950 methyl-accepting chemotaxis sensory transducer (RefSeq) set4IT096 -1.82451004123907 -6.98297962302143 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026836 Shewana3_3965 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase (RefSeq) set4IT076 -2.19085425262741 -9.25050876770615 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026836 Shewana3_3965 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase (RefSeq) set4IT077 -2.32239740797673 -11.0476789471873 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026838 Shewana3_3967 O-succinylbenzoate synthase (RefSeq) set4IT077 -2.11580058279722 -9.14830112760674 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026838 Shewana3_3967 O-succinylbenzoate synthase (RefSeq) set4IT076 -1.99045272020515 -6.7443387408458 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026839 Shewana3_3968 O-succinylbenzoate-CoA ligase (RefSeq) set4IT076 -2.63083908059553 -7.58784166955374 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026839 Shewana3_3968 O-succinylbenzoate-CoA ligase (RefSeq) set4IT077 -3.00129941389774 -8.04215874985781 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026848 Shewana3_3977 NapC/NirT cytochrome c domain-containing protein (RefSeq) set4IT077 -7.70326901664297 -16.019157160552 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026848 Shewana3_3977 NapC/NirT cytochrome c domain-containing protein (RefSeq) set4IT076 -8.33250996699532 -18.1745586178385 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026853 Shewana3_3982 RND family efflux transporter MFP subunit (RefSeq) set4IT076 -1.02516285387595 -6.32491584437127 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026872 Shewana3_4001 MATE efflux family protein (RefSeq) set3IT059 -1.33892594112917 -5.97422891192607 Chloride 500 mM stress Sodium Chloride 500 mM NA 7026883 Shewana3_4012 sulfatase (RefSeq) set3IT086 1.00308193761748 6.66117568914066 methylglyoxal 0.004 vol% stress methylglyoxal 0.004 vol% NA 7026884 Shewana3_4013 RNA-binding S1 domain-containing protein (RefSeq) set4IT072 -1.98184535825012 -14.5549568125556 Tetracycline 0.001 mg/ml stress Tetracycline hydrochloride 0.001 mg/ml NA 7026884 Shewana3_4013 RNA-binding S1 domain-containing protein (RefSeq) set1H36 -1.48354230161863 -6.0469098436613 propionate (C) carbon source Sodium propionate 20 mM NA 7026884 Shewana3_4013 RNA-binding S1 domain-containing protein (RefSeq) set1H29 -1.42415617542992 -9.45135788430168 L-Alanine (C) carbon source L-Alanine 20 mM NA 7026888 Shewana3_4017 osmolarity response regulator (RefSeq) set4IT072 -1.44420510121357 -11.6670740602046 Tetracycline 0.001 mg/ml stress Tetracycline hydrochloride 0.001 mg/ml NA 7026889 Shewana3_4018 osmolarity sensor protein (RefSeq) set4IT072 -1.5703961486815 -7.27475484989464 Tetracycline 0.001 mg/ml stress Tetracycline hydrochloride 0.001 mg/ml NA 7026892 Shewana3_4021 hypothetical protein (RefSeq) set3IT061 -1.35412748581539 -5.13585339029498 LB lb NA NA 7026900 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) set4IT094 -1.3721708404565 -8.54735302425327 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026900 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) set4IT093 -1.34929547864522 -8.59422923592203 outer cut, LB soft agar motility assay motility Agar 3 g/L NA 7026901 Shewana3_4030 hypothetical protein (RefSeq) set2IT039 3.96331351565006 7.79303367407683 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7026902 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) set2IT039 3.14899342372065 7.87135186048719 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7026902 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) set3IT082 1.60254020237474 12.3288588025856 Spectinomycin 0.025 mg/ml stress Spectinomycin dihydrochloride pentahydrate 0.025 mg/ml NA 7026906 Shewana3_4035 protoheme IX farnesyltransferase (RefSeq) set3IT082 1.36567769020686 6.3275540755529 Spectinomycin 0.025 mg/ml stress Spectinomycin dihydrochloride pentahydrate 0.025 mg/ml NA 7026906 Shewana3_4035 protoheme IX farnesyltransferase (RefSeq) set2IT039 1.36436685219462 6.02251587946055 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7026912 Shewana3_4041 LemA family protein (RefSeq) set1H13 2.65484945502649 11.3782616606809 L-Alanine (C) carbon source L-Alanine 20 mM NA 7026912 Shewana3_4041 LemA family protein (RefSeq) set1H29 2.92623011446203 15.2152904273513 L-Alanine (C) carbon source L-Alanine 20 mM NA 7026930 Shewana3_4059 XRE family transcriptional regulator (RefSeq) set1H35 -2.91183024440235 -12.5908955200843 Tween 20 (C) carbon source Tween 20 1 vol% NA 7026930 Shewana3_4059 XRE family transcriptional regulator (RefSeq) set2IT004 -2.18479396482581 -11.5219775217451 L-Leucine (C) carbon source L-Leucine 20 mM NA 7026930 Shewana3_4059 XRE family transcriptional regulator (RefSeq) set2IT013 -2.10256191388382 -9.7492684687122 L-Leucine (C) carbon source L-Leucine 20 mM NA 7026931 Shewana3_4060 malate synthase (RefSeq) set2IT004 -2.3842868076214 -9.39648170548187 L-Leucine (C) carbon source L-Leucine 20 mM NA 7026931 Shewana3_4060 malate synthase (RefSeq) set2IT013 -2.5387926033251 -11.0806517908815 L-Leucine (C) carbon source L-Leucine 20 mM NA 7026931 Shewana3_4060 malate synthase (RefSeq) set1H35 -3.09897978657554 -9.03559349891574 Tween 20 (C) carbon source Tween 20 1 vol% NA 7026942 Shewana3_4071 isochorismate synthases (RefSeq) set4IT077 -1.92044424120188 -7.7978527987405 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026942 Shewana3_4071 isochorismate synthases (RefSeq) set4IT076 -1.99895403963872 -10.924682116645 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026946 Shewana3_4075 ATPase domain-containing protein (RefSeq) set1H20 -1.76972364107116 -6.74646296238005 propionate (C) carbon source Sodium propionate 20 mM NA 7026946 Shewana3_4075 ATPase domain-containing protein (RefSeq) set1H36 -2.30170910132675 -8.37662061443223 propionate (C) carbon source Sodium propionate 20 mM NA 7026946 Shewana3_4075 ATPase domain-containing protein (RefSeq) set4IT083 1.65469764713616 9.13343476127995 Choline chloride 450 mM stress Choline chloride 450 mM NA 7026947 Shewana3_4076 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) set2IT039 1.53241382572516 9.90069159902854 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7026948 Shewana3_4077 extracellular solute-binding protein (RefSeq) set4IT077 -1.59697897119768 -7.9653427521066 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026948 Shewana3_4077 extracellular solute-binding protein (RefSeq) set4IT076 -1.72114674015269 -8.0215057430176 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026949 Shewana3_4078 binding-protein-dependent transport systems inner membrane component (RefSeq) set4IT076 -1.67982308033651 -12.1010901312874 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026949 Shewana3_4078 binding-protein-dependent transport systems inner membrane component (RefSeq) set4IT077 -1.5415968535817 -11.1417479838265 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026950 Shewana3_4079 ABC transporter related (RefSeq) set4IT077 -1.70474904811281 -10.2331379856286 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026950 Shewana3_4079 ABC transporter related (RefSeq) set4IT076 -1.8627169711261 -12.8398470281685 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026964 Shewana3_4093 glycosyl transferase, group 1 (RefSeq) set3IT069 -1.90578364839701 -10.0783241533776 Fusidic 0.5 mg/ml stress Fusidic acid sodium salt 0.5 mg/ml NA 7026964 Shewana3_4093 glycosyl transferase, group 1 (RefSeq) set2IT039 1.25058263391462 6.2486588761042 Paraquat dichloride 0.008 mg/ml stress Paraquat dichloride 0.008 mg/ml NA 7026975 Shewana3_4104 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) set1H15 -8.71762556225183 -10.3891056271767 L-Threonine (C) carbon source L-Threonine 20 mM NA 7026997 Shewana3_4123 naphthoate synthase (RefSeq) set4IT076 -2.34780659956042 -12.8696185994177 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L 7026997 Shewana3_4123 naphthoate synthase (RefSeq) set4IT077 -2.29740646217929 -9.62797398706685 Anaero. fumarate as e acceptor anaerobic Sodium Fumarate dibasic 30 mM Yeast Extract 0.1 g/L