---

Group Meetings

---

Wednesdays from 4-6 pm (*unless otherwise noted)

Location: Calvin Seminar Room 116 (unless otherwise noted)

* Adam will be out of town

Meeting schedule

Date	Speaker	Title	Food Preparer
01/09/04 9 am	Alex Sadovsky	The Biomechanics of Epidermal Wound Healing in Embryos	Gwyneth Terry
01/14/04	Ken Koster	The Hitchhiker's Guide to Computational Biology Tool Integration	Sergei Plyasunov
01/21/04	Richard Koche	Combining Comparative Genomics and Expression Data to Predict Regulatory Networks	Amoolya Singh
01/26/04-Monday	Phillip Kim	Understanding Subsystems in Biology	No Food provided
01/28/04	Kevin Keck	The Biopathways Graph Data Manager: Current Status and Open Issues	Nancy Slater
02/04/04*	No Meeting	No Meeting	No Meeting
02/11/04	Robin Osterhout	Stability Mechanisms in Bacteriophage Lambda	Leor Weinberger
02/18/04	Denise Wolf	Diversity in times of adversity: Probabilistic strategies in microbial survival games	Tingting Zhang
02/25/04	Hui Ge	Integration of functional genomic information: from yeast to worm	Denise Wolf
03/17/04	Michael Samoilov	Renormalization MESSforMaster Equation Systems	Eric Alm
03/24/04	Tingting Zhang	Committed: to Live or Die An Examination of Mitochondria-dependent Apoptosis Pathway	keith keller
03/31/04	Leor Weinberger	Stochastic switching in HIV-1 Tat transactivation as a possible mechanism leading to HIV proviral latency	Michael Samoilov
04/07/04 *9 am	Iftach Nachman	Inferring Quantitative Models of Regulatory Networks From Expression Data	Gwyneth Terry
04/14/04	Alex Gilman	PathwayBuilder: Progress and Problems	Robin Osterhout
04/21/04*	No Meeting	No Meeting	No Meeting
04/28/04	Amoolya Singh	The Evolution of Gene Regulatory Networks: A Comparative Study in 100 Bacterial Species	Steve Andrews
05/05/04	Katherine Huang	Automatic Genome Annotation	Matt Onsum
05/12/04	Chris Rao	Genetic Program Governing Sequential Flagellar Assembly	Alex Gilman
05/19/04	Eric Alm		Kevin Keck
05/26/04	Tim Ham	Forward engineering of a genetic switch using site-specific inversion elements	Ken Koster
06/02/04	Brian Carnes	Bionets Graph Exploration tool	Ken Koster
06/23/04	Li Yan	Liver In Silico -- Connecting Molecular Events and Anatomic Structure to Liver Function	Chris Rao
06/23/04	Chris Anderson	Paradigm for synthetic therapeutic bacteria	Chris Rao
06/30/04	Steve Andrews	E. coli division site selectionwith the MinCDE proteins	Abbas Rizvi
07/14/04	Mike Cantor	Forward Engineering of Genetic Circuits:A Pulse Generator	Chris Anderson
07/21/04	Keith Erickson	Models of chemotaxis in multiple gradients	Janet Jacobsen
07/28/04	Gavin Price	Analysis of the Competence Signaling Pathway in Bacillus Subtilis	Keith Erickson
07/28/04	Matt Onsum	AfCS Data Collaboration: an approach to mechanistic model buiding	Keith Erickson
08/04/2004	Patrick Flaherty	Model Validation and Experiment Design for Biological Systems	Morgan Price
08/11/2004	Sergei Plyasunov	Excursions in stochastic dynamics of complex (biological) systems	Patrick Flaherty
08/11/2004	Morgan Price	Operons: Where and Why	Patrick Flaherty
08/18/2004	Tomer Altman	Synthetic Stoichiometric Networks: Theory and Application	Gavin Price
09/08/2004	TingTing Zhang	A systems study of apoptosis	Mike Cantor
09/15/2004	Michael Samoilov	Why no Big MAK makes ME bacteria happy	Sarah Wang
09/29/2004	Alex Gilman	Live presentation	Tim Ham
10/20/2004	Eric Alm	The Structure and Evolution of Operons	Katherine Huang
10/27/2004	Tim Ham	Forward engineering of a genetic switch using site-specific inversion elements	Michael Samoilov
11/03/2004	Steve Andrews	Progress on Min	Robin Osterhout
11/10/2004	Sarah Wang	Is metabolic network topology a constraint for operon evolution?	Steve Andrews
11/17/2004	Sergei Plyasunov	Excursions in stochastic dynamics of complex biological systems,Part II: Computational problems	Matt Onsum
11/24/2004	Keith Erickson	Neutrophil chemotaxis in multiple chemoattractant gradients	Alex Gilman
12/01/2004	Robin Osterhout		Li Yan

View 2005 Group Meetings

View 2004 Group Meetings

View 2003 Group Meetings

View really old group meetings

updated last 01/13/06