Warning: All code on this site is, unless explicitedly noted, considered private and unreleased. Unauthorized access of this code is forbidden.



Bio/Spice will be a suite of integrated databases and analysis software for functional genomics and biological pathway analysis. It is, as usual, under development and we release, very sporadically, updates to the software.


A tool for deducing the structure of biochemical reaction networks from diverse types of data.


Code relating to analysis of Myxococcus xanthus development.


Molecular design programs for creating genetic cassettes with specified gene expression profiles.


Yeast Competition Code for analysis of yeast haploinsufficiency trials and expression chips. General purpose molecular profiling tools may be discussed here as well..


Gene expression regulatory site prediction programs



Department of Bioengineering, University of California, Berkeley, CA 94720
Physical Biosciences Division, 1 Cyclotron Road, MS Stanley, Lawrence Berkeley National Laboratory, Berkeley, CA 94720
(tel) 510-495-2116   (fax) 510-486-6219
© Adam Arkin, 2000,. All Rights Reserved


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